Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

GM13976

Tissue

blood

Lineage

mesoderm

Description

lymphoblastoid cell line, clinically normal; monozygotic twin sister with Cornelia De Lange syndrome is GM13977

Sample

source_name

GM13976

biomaterial_provider

Coriell

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

controlid

wgEncodeEH003443

labversion

fseq v 1.84

cell

GM13976

cell organism

human

cell description

lymphoblastoid cell line, clinically normal; monozygotic twin sister with Cornelia De Lange syndrome is GM13977

cell karyotype

normal

cell lineage

mesoderm

cell sex

F

antibody

Input

antibody description

Control signal which may be subtracted from experimental raw signal before peaks are called.

controlid

wgEncodeEH003443

Sequenced DNA Library

library_name

GSM1006894: UT-A_ChipSeq_GM13976_Input

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

8756236

Reads aligned (%)

45.1

Duplicates removed (%)

6.4

Number of peaks

95 (qval < 1E-05)

hg19

Number of total reads

8756236

Reads aligned (%)

44.3

Duplicates removed (%)

6.8

Number of peaks

165 (qval < 1E-05)