SRX188595
GSM1006153: H3K27me3 WSU-DLCL2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
WSU-DLCL2
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma B-cell

Attributes by original data submitter

Sample

source_name
WSU-DLCL2
cell line
WSU-DLCL2
genotype/variation
EZH2 mutant
average gic50
134 nM
chip antibody
anti-H3K27me3
chip antibody vendor
Millipore

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
40918013
Reads aligned (%)
99.2
Duplicates removed (%)
4.0
Number of peaks
1562 (qval < 1E-05)

hg19

Number of total reads
40918013
Reads aligned (%)
99.0
Duplicates removed (%)
4.2
Number of peaks
1609 (qval < 1E-05)

Base call quality data from DBCLS SRA