Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K27me3

Cell type

Cell type Class
Blood
Cell type
Pfeiffer
Primary Tissue
Blood
Tissue Diagnosis
Hodgkin's Lymphoma

Attributes by original data submitter

Sample

source_name
Pfeiffer
cell line
Pfeiffer
genotype/variation
EZH2 mutant
average gic50
28 nM
chip antibody
anti-H3K27me3
chip antibody vendor
Millipore

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
39082842
Reads aligned (%)
99.2
Duplicates removed (%)
3.6
Number of peaks
1773 (qval < 1E-05)

hg19

Number of total reads
39082842
Reads aligned (%)
98.8
Duplicates removed (%)
4.1
Number of peaks
1814 (qval < 1E-05)

Base call quality data from DBCLS SRA