Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
CDK7

Cell type

Cell type Class
Blood
Cell type
Jurkat
Primary Tissue
Blood
Tissue Diagnosis
Leukemia Acute Lymphocytic

Attributes by original data submitter

Sample

source_name
T-ALL
cell type
Jurkat T-ALL cells
chip antibody
CDK7
chip antibody vendor
Bethyl Labs
young_id
20160406_4614

Sequenced DNA Library

library_name
ERROR: cannot retrieve data from NCBI: too many requests
library_strategy
ERROR: cannot retrieve data from NCBI: too many requests
library_source
ERROR: cannot retrieve data from NCBI: too many requests
library_selection
ERROR: cannot retrieve data from NCBI: too many requests
library_construction_protocol
ERROR: cannot retrieve data from NCBI: too many requests

Sequencing Platform

instrument_model
ERROR: cannot retrieve data from NCBI: too many requests
cycle_sequence
ERROR: cannot retrieve data from NCBI: too many requests
cycle_count
ERROR: cannot retrieve data from NCBI: too many requests
flow_sequence
ERROR: cannot retrieve data from NCBI: too many requests
flow_count
ERROR: cannot retrieve data from NCBI: too many requests
key_sequence
ERROR: cannot retrieve data from NCBI: too many requests

hg19

Number of total reads
37921851
Reads aligned (%)
50.7
Duplicates removed (%)
9.4
Number of peaks
10990 (qval < 1E-05)

hg38

Number of total reads
37921851
Reads aligned (%)
51.8
Duplicates removed (%)
8.3
Number of peaks
10981 (qval < 1E-05)

Base call quality data from DBCLS SRA