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Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: cbt
wikigenes
PDBj
CellType: Imaginal wing disc
ATCC
MeSH
RIKEN BRC
SRX187589
GSM1005586: Cabut ChIPSeq; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
cbt
Cell type
Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA
Attributes by original data submitter
Sample
source_name
Wing imaginal discs
genotype
wt
developmental stage
third instar larvae
tissue
wing imaginal disc
chip antibody
Cabut
chip antibody manufacturer
Generated in N. Paricio's lab (Belacortu et al. 2011)
genetic background
Canton S
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
38257052
Reads aligned (%)
59.6
Duplicates removed (%)
63.5
Number of peaks
3108 (qval < 1E-05)
dm3
Number of total reads
38257052
Reads aligned (%)
60.0
Duplicates removed (%)
60.6
Number of peaks
2084 (qval < 1E-05)
Base call quality data from
DBCLS SRA