SRX187588
GSM1005585: Brinker ChIPSeq; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
brk

Cell type

Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA

Attributes by original data submitter

Sample

source_name
Wing imaginal discs
genotype
wt
developmental stage
third instar larvae
tissue
wing imaginal disc
chip antibody
Brinker
chip antibody manufacturer
Generated in A. Teleman's lab
genetic background
Canton S

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

dm3

Number of total reads
35702391
Reads aligned (%)
5.5
Duplicates removed (%)
68.5
Number of peaks
1152 (qval < 1E-05)

dm6

Number of total reads
35702391
Reads aligned (%)
4.9
Duplicates removed (%)
71.3
Number of peaks
998 (qval < 1E-05)

Base call quality data from DBCLS SRA