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Install and launch IGV before selecting data to visualize
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Error connecting to IGV?
Analyze
For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: brk
wikigenes
PDBj
CellType: Imaginal wing disc
ATCC
MeSH
RIKEN BRC
SRX187588
GSM1005585: Brinker ChIPSeq; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
TFs and others
Antigen
brk
Cell type
Cell type Class
Larvae
Cell type
Imaginal wing disc
NA
NA
Attributes by original data submitter
Sample
source_name
Wing imaginal discs
genotype
wt
developmental stage
third instar larvae
tissue
wing imaginal disc
chip antibody
Brinker
chip antibody manufacturer
Generated in A. Teleman's lab
genetic background
Canton S
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina Genome Analyzer
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
35702391
Reads aligned (%)
17.2
Duplicates removed (%)
71.3
Number of peaks
998 (qval < 1E-05)
dm3
Number of total reads
35702391
Reads aligned (%)
17.4
Duplicates removed (%)
68.5
Number of peaks
1152 (qval < 1E-05)
Base call quality data from
DBCLS SRA