Antigen

Antigen Class

TFs and others

Antigen

Hif1a

Cell type

Cell type Class

Blood

Cell type

Th17 Cells

MeSH Description

A subset of helper-effector T-lymphocytes which synthesize and secrete INTERLEUKINS IL-17; IL-17F; and IL-22. These cytokines are involved in host defenses and tissue inflammation in autoimmune diseases.

Sample

source_name

Th17 in vitro

genotype

wt

control

SL10569

factor

Hif1a

time_point

48h

application

ChIP-Seq

cell type

Th17

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

39968837

Reads aligned (%)

86.5

Duplicates removed (%)

27.4

Number of peaks

3769 (qval < 1E-05)

mm9

Number of total reads

39968837

Reads aligned (%)

86.2

Duplicates removed (%)

27.4

Number of peaks

3745 (qval < 1E-05)