Antigen

Antigen Class

TFs and others

Antigen

KAT2B

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

source_name

K562

biomaterial_provider

ATCC

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

antibody antibodydescription

Rabbit Polyclonal Antigen Affinity Purified, Unconjugated, Liquid

antibody targetdescription

PCAF (P300/CBP-associated factor) is a histone acetyltransferase (HAT) identified as a factor that associates with P300/CBP, a transcriptional coactivator of nuclear hormone receptors and other transcription factors.

antibody vendorname

Bethyl Laboratories

antibody vendorid

A301-666A

controlid

wgEncodeEH000052

replicate

1

softwareversion

ScriptureVPaperR3

cell sex

F

antibody

PCAF

antibody antibodydescription

Rabbit Polyclonal Antigen Affinity Purified, Unconjugated, Liquid

antibody targetdescription

PCAF (P300/CBP-associated factor) is a histone acetyltransferase (HAT) identified as a factor that associates with P300/CBP, a transcriptional coactivator of nuclear hormone receptors and other transcription factors.

antibody vendorname

Bethyl

antibody vendorid

A301-666A

treatment

None

treatment description

No special treatment or protocol applies

control

std

control description

Standard input signal for most experiments.

controlid

K562/None/Input/std

labversion

Illumina_HiSeq_2000

labversion description

Illumina HiSeq 2000

softwareversion

ScriptureVPaperR3

Sequenced DNA Library

library_name

GSM1003566: Broad_ChipSeq_K562_PCAF

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg19

Number of total reads

42854933

Reads aligned (%)

44.0

Duplicates removed (%)

42.4

Number of peaks

1174 (qval < 1E-05)

hg38

Number of total reads

42854933

Reads aligned (%)

45.8

Duplicates removed (%)

40.6

Number of peaks

998 (qval < 1E-05)