Antigen

Antigen Class

TFs and others

Antigen

WHSC1

Cell type

Cell type Class

Blood

Cell type

K-562

Primary Tissue

Blood

Tissue Diagnosis

Leukemia Chronic Myelogenous

Sample

source_name

K562

biomaterial_provider

ATCC

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

antibody antibodydescription

mouse monoclonal, raised against a fusion protein, corresponding to amino acids 1-647 of Human GST-WHSC1/NSD2.

antibody targetdescription

This is a probable histone methyltransferase, which may act as a transcription regulator that binds DNA and suppresses IL5 transcription.

antibody vendorname

abcam

antibody vendorid

ab75359

controlid

wgEncodeEH000052

replicate

1

softwareversion

ScriptureVPaperR3

cell sex

F

antibody

NSD2_(ab75359)

antibody antibodydescription

mouse monoclonal, raised against a fusion protein, corresponding to amino acids 1-647 of Human GST-WHSC1/NSD2.

antibody targetdescription

This is a probable histone methyltransferase, which may act as a transcription regulator that binds DNA and suppresses IL5 transcription.

antibody vendorname

Abcam

antibody vendorid

ab75359

treatment

None

treatment description

No special treatment or protocol applies

control

std

control description

Standard input signal for most experiments.

controlid

K562/None/Input/std

labversion

Illumina_GA2x

labversion description

Illumina Genome Analyzer IIx

softwareversion

ScriptureVPaperR3

Sequenced DNA Library

library_name

GSM1003492: Broad_ChipSeq_K562_NSD2_(ab75359)

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

44482803

Reads aligned (%)

86.1

Duplicates removed (%)

7.1

Number of peaks

580 (qval < 1E-05)

hg19

Number of total reads

44482803

Reads aligned (%)

85.5

Duplicates removed (%)

8.0

Number of peaks

630 (qval < 1E-05)