Antigen

Antigen Class

Histone

Antigen

H4K20me1

Cell type

Cell type Class

Blood

Cell type

DND-41

Primary Tissue

Blood

Tissue Diagnosis

Leukemia

Sample

source_name

Dnd41

biomaterial_provider

DSMZ

datatype

ChipSeq

datatype description

Chromatin IP Sequencing

antibody antibodydescription

rabbit polyclonal. Antibody Target: H4K20me1

antibody targetdescription

Histone H4 (mono-methyl K20). Is associated with active and accessible regions. In mammals, PR-Set7 specifically catalyzes H4K20 monomethylation. NOTE CONTRAST to H3K20me3 which is associated with heterochromatin and DNA repair.

antibody vendorname

abcam

antibody vendorid

ab9051

controlid

wgEncodeEH002434

replicate

1,2

softwareversion

ScriptureVPaperR3

cell sex

M

antibody

H4K20me1

antibody antibodydescription

rabbit polyclonal. Antibody Target: H4K20me1

antibody targetdescription

Histone H4 (mono-methyl K20). Is associated with active and accessible regions. In mammals, PR-Set7 specifically catalyzes H4K20 monomethylation. NOTE CONTRAST to H3K20me3 which is associated with heterochromatin and DNA repair.

antibody vendorname

Abcam

antibody vendorid

ab9051

treatment

None

treatment description

No special treatment or protocol applies

control

std

control description

Standard input signal for most experiments.

controlid

Dnd41/Input/std

softwareversion

ScriptureVPaperR3

Sequenced DNA Library

library_name

GSM1003481: Broad_ChipSeq_Dnd41_H4K20me1

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer

hg38

Number of total reads

61164707

Reads aligned (%)

92.0

Duplicates removed (%)

4.1

Number of peaks

1993 (qval < 1E-05)

hg19

Number of total reads

61164707

Reads aligned (%)

91.5

Duplicates removed (%)

5.1

Number of peaks

1915 (qval < 1E-05)