Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
shep

Cell type

Cell type Class
Cell line
Cell type
ML-DmBG3-c2
Source
y[1] v[1] f[1] mal[F1]
Tissue Source
central nervous system
Developmental Stage
third instar larval stage

Attributes by original data submitter

Sample

source_name
BG3 cells
antibody
Shep, rabbit

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm3

Number of total reads
20551393
Reads aligned (%)
34.8
Duplicates removed (%)
46.8
Number of peaks
3783 (qval < 1E-05)

dm6

Number of total reads
20551393
Reads aligned (%)
32.4
Duplicates removed (%)
50.1
Number of peaks
4091 (qval < 1E-05)

Base call quality data from DBCLS SRA