SRX186072
GSM1001328: Non-WGA-ES-input; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cell
tissue
Embryonic stem cell
strain
E14
ChIP
none, input-DNA

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
85057768
Reads aligned (%)
92.2
Duplicates removed (%)
13.6
Number of peaks
1627 (qval < 1E-05)

mm9

Number of total reads
85057768
Reads aligned (%)
92.0
Duplicates removed (%)
13.6
Number of peaks
1726 (qval < 1E-05)

Base call quality data from DBCLS SRA