SRX186070
GSM1001326: 100kCells-ES-input-WGA; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
Embryonic stem cell
tissue
Embryonic stem cell
number of cells
100k Cells
strain
E14
ChIP
none, input-DNA

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
126196163
Reads aligned (%)
86.5
Duplicates removed (%)
40.7
Number of peaks
103716 (qval < 1E-05)

mm9

Number of total reads
126196163
Reads aligned (%)
86.4
Duplicates removed (%)
40.7
Number of peaks
103932 (qval < 1E-05)

Base call quality data from DBCLS SRA