SRX185893
GSM1000979: GCB rep2 BCL6 CHIP; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
BCL6

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
Germinal center B cells
chip antibody
BCL6 N-3
cell type
Germinal center B cells
chip antibody manufacturer
Santa Cruz

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 1000

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
78458466
Reads aligned (%)
80.0
Duplicates removed (%)
13.4
Number of peaks
2695 (qval < 1E-05)

hg38

Number of total reads
78458466
Reads aligned (%)
82.4
Duplicates removed (%)
11.7
Number of peaks
4809 (qval < 1E-05)

Base call quality data from DBCLS SRA