Antigen

Antigen Class

TFs and others

Antigen

Batf

Cell type

Cell type Class

Blood

Cell type

Th17 Cells

MeSH Description

A subset of helper-effector T-lymphocytes which synthesize and secrete INTERLEUKINS IL-17; IL-17F; and IL-22. These cytokines are involved in host defenses and tissue inflammation in autoimmune diseases.

Sample

source_name

Th17 polarized cells

strain

C57BL/6

cell type/growth condition

Naïve T-cells from spleen under Th17 polarizing conditions

timepoint

42 hrs

chip antibody

BATF

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

mm10

Number of total reads

33210220

Reads aligned (%)

60.2

Duplicates removed (%)

9.0

Number of peaks

12174 (qval < 1E-05)

mm9

Number of total reads

33210220

Reads aligned (%)

60.1

Duplicates removed (%)

9.1

Number of peaks

12186 (qval < 1E-05)