SRX185709
GSM999793: PR-binding T47D ChIP-Seq; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PGR

Cell type

Cell type Class
Breast
Cell type
T-47D
Primary Tissue
Breast
Tissue Diagnosis
Adenocarcinoma Ductal

Attributes by original data submitter

Sample

source_name
T47D cells
cell line
T47D
treatment
RU486
chip antibody
PR
chip antibody manufacturer
Santa Cruz

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg19

Number of total reads
17688759
Reads aligned (%)
93.0
Duplicates removed (%)
5.4
Number of peaks
36703 (qval < 1E-05)

hg38

Number of total reads
17688759
Reads aligned (%)
93.9
Duplicates removed (%)
5.0
Number of peaks
36666 (qval < 1E-05)

Base call quality data from DBCLS SRA