Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
PGR

Cell type

Cell type Class
Muscle
Cell type
Leiomyoma
MeSH Description
A benign tumor derived from smooth muscle tissue, also known as a fibroid tumor. They rarely occur outside of the UTERUS and the GASTROINTESTINAL TRACT but can occur in the SKIN and SUBCUTANEOUS TISSUE, probably arising from the smooth muscle of small blood vessels in these tissues.

Attributes by original data submitter

Sample

source_name
Leiomyoma cells
cell type
Leiomyoma cells
treatment
RU486
chip antibody
PR
chip antibody manufacturer
Santa Cruz

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
10225801
Reads aligned (%)
91.1
Duplicates removed (%)
6.4
Number of peaks
7041 (qval < 1E-05)

hg38

Number of total reads
10225801
Reads aligned (%)
92.0
Duplicates removed (%)
6.1
Number of peaks
7002 (qval < 1E-05)

Base call quality data from DBCLS SRA