SRX184864
GSM999183: Treg Input Rep2; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Treg
NA
NA

Attributes by original data submitter

Sample

source_name
Treg Input
cell type
Foxp3-positive CD4+ T cells
cell source
Primary Mouse T cells isolated ex-vivo and sorted

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
30123059
Reads aligned (%)
96.0
Duplicates removed (%)
6.2
Number of peaks
467 (qval < 1E-05)

mm9

Number of total reads
30123059
Reads aligned (%)
95.8
Duplicates removed (%)
6.2
Number of peaks
492 (qval < 1E-05)

Base call quality data from DBCLS SRA