SRX184862
GSM999181: Treg Input Rep1; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Treg
NA
NA

Attributes by original data submitter

Sample

source_name
Treg Input
cell type
Foxp3-positive CD4+ T cells
cell source
Primary Mouse T cells isolated ex-vivo and sorted

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
44178292
Reads aligned (%)
87.5
Duplicates removed (%)
27.8
Number of peaks
806 (qval < 1E-05)

mm9

Number of total reads
44178292
Reads aligned (%)
87.3
Duplicates removed (%)
27.8
Number of peaks
925 (qval < 1E-05)

Base call quality data from DBCLS SRA