Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
Glial cells
NA
NA

Attributes by original data submitter

Sample

source_name
Early glial cells
strain
gcm-Gal4,UAS-mCDGFP/cyo; UAS-5xFLAG-blrp-mCherry-RanGap
tissue
Early glial cells
chip antibody
H3K4me3
chip antibody vendor
Abcam
Stage
5-7h AEL

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions accompanying the DNA Sample Kit.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
38994090
Reads aligned (%)
97.8
Duplicates removed (%)
62.9
Number of peaks
7520 (qval < 1E-05)

dm3

Number of total reads
38994090
Reads aligned (%)
98.0
Duplicates removed (%)
61.5
Number of peaks
7967 (qval < 1E-05)

Base call quality data from DBCLS SRA