SRX184328
GSM998271: Th1 WCE; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
T cells
NA
NA

Attributes by original data submitter

Sample

source_name
T cells
antibody
None
cell type
T-cell
cell number
100000000
genotype
wild type

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
37522692
Reads aligned (%)
85.5
Duplicates removed (%)
10.2
Number of peaks
744 (qval < 1E-05)

mm9

Number of total reads
37522692
Reads aligned (%)
85.3
Duplicates removed (%)
10.2
Number of peaks
839 (qval < 1E-05)

Base call quality data from DBCLS SRA