SRX183916
GSM999014: CD4 Input donor E; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+CD25-CD45 RA+ naive conventional T cells
cell type
CD4+CD25-CD45 RA+ naive conventional T cells
donor
E
donor gender
male
chip antibody
Input

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
37649884
Reads aligned (%)
98.8
Duplicates removed (%)
17.9
Number of peaks
1292 (qval < 1E-05)

hg19

Number of total reads
37649884
Reads aligned (%)
97.8
Duplicates removed (%)
19.5
Number of peaks
1302 (qval < 1E-05)

Base call quality data from DBCLS SRA