SRX183912
GSM999010: CD19 Input donor A; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
B-cell (CD19+)
Tissue
Blood
Lineage
primaryCells
Description
B Cell , CD19+

Attributes by original data submitter

Sample

source_name
CD19+ B cells
cell type
CD19+ B cells
donor
A
donor gender
male
chip antibody
Input

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
34201894
Reads aligned (%)
98.9
Duplicates removed (%)
22.1
Number of peaks
1188 (qval < 1E-05)

hg19

Number of total reads
34201894
Reads aligned (%)
98.0
Duplicates removed (%)
23.8
Number of peaks
1241 (qval < 1E-05)

Base call quality data from DBCLS SRA