SRX183886
GSM998953: Input DNA, rep1; Drosophila melanogaster; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Embryo
Cell type
2-4h embryos
NA
NA

Attributes by original data submitter

Sample

source_name
Input DNA
strain
Oregon R (wild type)
tissue
whole-embryo
time point
2-4hr after egg laying (AEL)
chip antibody
Anti Twist

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

dm6

Number of total reads
6868536
Reads aligned (%)
95.4
Duplicates removed (%)
20.1
Number of peaks
2041 (qval < 1E-05)

dm3

Number of total reads
6868536
Reads aligned (%)
95.6
Duplicates removed (%)
17.6
Number of peaks
622 (qval < 1E-05)

Base call quality data from DBCLS SRA