SRX183790
GSM998927: nTreg Input Biotin ChIPseq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Treg
NA
NA

Attributes by original data submitter

Sample

source_name
nTreg cells, Foxo1tagBirA mice
cell type
nTreg, Foxo1tagBirA strepdavidin Input
chip antibody
none

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
35445131
Reads aligned (%)
98.5
Duplicates removed (%)
7.2
Number of peaks
677 (qval < 1E-05)

mm9

Number of total reads
35445131
Reads aligned (%)
98.4
Duplicates removed (%)
7.3
Number of peaks
754 (qval < 1E-05)

Base call quality data from DBCLS SRA