SRX183788
GSM998925: nTreg Foxo1 Biotin ChIPseq; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Foxo1

Cell type

Cell type Class
Blood
Cell type
Treg
NA
NA

Attributes by original data submitter

Sample

source_name
nTreg cells, Foxo1tagBirA mice
cell type
nTreg, Foxo1tagBirA strepdavidin ChIP
chip antibody
Strepdavidin

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
55547717
Reads aligned (%)
51.3
Duplicates removed (%)
43.3
Number of peaks
731 (qval < 1E-05)

mm9

Number of total reads
55547717
Reads aligned (%)
51.2
Duplicates removed (%)
43.4
Number of peaks
780 (qval < 1E-05)

Base call quality data from DBCLS SRA