Antigen

Antigen Class

TFs and others

Antigen

AR

Cell type

Cell type Class

Prostate

Cell type

LNCAP

Primary Tissue

Prostate

Tissue Diagnosis

Carcinoma

Sample

source_name

LNCaP Cell Line

cell line

LNCaP

cell cycle arrest treatment

2μg/mL aphidicolin for 15 hours, followed by washout and treatment with 50ng/mL nocodozole for 9 hours +3 hour 10nm DHT

dht treatment

+

chip antibody

AR N-20 (SC-816)

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

ChIP was performed as previously described by Schmidt et al 2009 Illumina library prep kit was utilyzed according to manufacturer's instructions

Sequencing Platform

instrument_model

Illumina Genome Analyzer IIx

hg38

Number of total reads

28686071

Reads aligned (%)

75.7

Duplicates removed (%)

19.7

Number of peaks

38610 (qval < 1E-05)

hg19

Number of total reads

28686071

Reads aligned (%)

75.3

Duplicates removed (%)

20.5

Number of peaks

38508 (qval < 1E-05)