SRX181464
GSM994752: SUDHL6 iEZH H3K36me1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K36me1

Cell type

Cell type Class
Blood
Cell type
SU-DHL-6
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma

Attributes by original data submitter

Sample

source_name
Diffuse large B cell lymphoma
treatment
iEZH
cell line
SUDHL6
chip antibody
H3K36me1
chip antibody manufacturer
SysBio

Sequenced DNA Library

library_name
GSM994752: SUDHL6 iEZH H3K36me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
49362142
Reads aligned (%)
99.2
Duplicates removed (%)
2.9
Number of peaks
1023 (qval < 1E-05)

hg19

Number of total reads
49362142
Reads aligned (%)
98.5
Duplicates removed (%)
4.2
Number of peaks
1176 (qval < 1E-05)

Base call quality data from DBCLS SRA