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For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For hg38
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For hg19
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For hg38
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For hg19
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K36me1
wikigenes
PDBj
CellType: SU-DHL-6
ATCC
MeSH
RIKEN BRC
Variation
TogoVar
SRX181463
GSM994751: SUDHL6 DMSO H3K36me1; Homo sapiens; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K36me1
Cell type
Cell type Class
Blood
Cell type
SU-DHL-6
Primary Tissue
Blood
Tissue Diagnosis
Lymphoma
Attributes by original data submitter
Sample
source_name
Diffuse large B cell lymphoma
treatment
DMSO
cell line
SUDHL6
chip antibody
H3K36me1
chip antibody manufacturer
SysBio
Sequenced DNA Library
library_name
GSM994751: SUDHL6 DMSO H3K36me1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
hg38
Number of total reads
40744950
Reads aligned (%)
99.1
Duplicates removed (%)
3.0
Number of peaks
939 (qval < 1E-05)
hg19
Number of total reads
40744950
Reads aligned (%)
98.3
Duplicates removed (%)
4.3
Number of peaks
1112 (qval < 1E-05)
Base call quality data from
DBCLS SRA