Antigen

Antigen Class

Histone

Antigen

H3K4me1

Cell type

Cell type Class

Lung

Cell type

MRC-5

Primary Tissue

Lung

Tissue Diagnosis

Normal

Sample

source_name

MRC5_H3K4me1

chip antibody

H3K4me1 (Abcam ab8895 Lot: GR243233-1-1)

cell line

MRC5 fibroblasts

passage

8

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

See ChIP-Endo Protocol.pdf

Sequencing Platform

instrument_model

Illumina HiSeq 2500

hg38

Number of total reads

14750885

Reads aligned (%)

86.7

Duplicates removed (%)

5.6

Number of peaks

54 (qval < 1E-05)

hg19

Number of total reads

14750885

Reads aligned (%)

86.5

Duplicates removed (%)

5.6

Number of peaks

52 (qval < 1E-05)