Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
MYC

Cell type

Cell type Class
Lung
Cell type
A549
Primary Tissue
Lung
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
A549 cells
cell line
A549
tissue
lung carcinoma
chip antibody
anti-c-Myc monoclonal, Clone 9E10
chip vendor
Sigma
transfected
myc-tagged pcDNA3-NME2

Sequenced DNA Library

library_name
GSM991047: NME2 Chip-seq Replicate 2(after NME2 induced A549)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg19

Number of total reads
6383530
Reads aligned (%)
21.0
Duplicates removed (%)
49.1
Number of peaks
68892 (qval < 1E-05)

hg38

Number of total reads
6383530
Reads aligned (%)
21.1
Duplicates removed (%)
48.9
Number of peaks
68891 (qval < 1E-05)

Base call quality data from DBCLS SRA