Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
RAJI
Primary Tissue
Blood
Tissue Diagnosis
Malignant Lymphoma - Burkitts Type

Attributes by original data submitter

Sample

source_name
IgG_ChIP-Seq
cell line
Burkitt lymphoma
cell type
Raji cells
chip-antibody
purified IgG

Sequenced DNA Library

library_name
GSM761688: ChIP-Seq_IgG
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

hg38

Number of total reads
11963119
Reads aligned (%)
83.9
Duplicates removed (%)
33.1
Number of peaks
293 (qval < 1E-05)

hg19

Number of total reads
11963119
Reads aligned (%)
82.9
Duplicates removed (%)
34.4
Number of peaks
618 (qval < 1E-05)

Base call quality data from DBCLS SRA