SRX180829
GSM991665: Input; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
IMR90 Human Fetal Lung Fibroblast cell line
cell line
IMR90
sample type
none
treatment
none

Sequenced DNA Library

library_name
GSM991665: Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29602481
Reads aligned (%)
92.9
Duplicates removed (%)
11.4
Number of peaks
610 (qval < 1E-05)

hg19

Number of total reads
29602481
Reads aligned (%)
92.4
Duplicates removed (%)
12.4
Number of peaks
899 (qval < 1E-05)

Base call quality data from DBCLS SRA