Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
E2F7

Cell type

Cell type Class
Lung
Cell type
IMR-90
Primary Tissue
Lung
Tissue Diagnosis
Normal

Attributes by original data submitter

Sample

source_name
IMR90 Human Fetal Lung Fibroblast cell line
chip antibody
E2F7 antibody
chip vendor
Kristian Helin's group (10 ug)
cell line
IMR90
cell state
senescent
treatment
infected with Ras and RB hairpin

Sequenced DNA Library

library_name
GSM991662: Senescent/shRB
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

hg19

Number of total reads
36416214
Reads aligned (%)
59.8
Duplicates removed (%)
30.9
Number of peaks
2544 (qval < 1E-05)

hg38

Number of total reads
36416214
Reads aligned (%)
61.5
Duplicates removed (%)
29.5
Number of peaks
2519 (qval < 1E-05)

Base call quality data from DBCLS SRA