SRX1806622
CEBPB ChIPSeq of SKOV3 shcontrol(2) cells

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
No description
Antigen
NA

Cell type

Cell type Class
Gonad
Cell type
SK-OV-3
Primary Tissue
Ovary
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

isolate
not applicable
age
64
biomaterial_provider
Cancer Biology Research Center, 1095 Jiefang Anv. Wuhan, 430035, China
sex
female
tissue
ovary
cell_line
SKOV3
cell_type
epithelial
disease
adenocarcinoma

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2500

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
29260366
Reads aligned (%)
59.0
Duplicates removed (%)
9.5
Number of peaks
1791 (qval < 1E-05)

hg19

Number of total reads
29260366
Reads aligned (%)
58.6
Duplicates removed (%)
10.6
Number of peaks
1878 (qval < 1E-05)

Base call quality data from DBCLS SRA