Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Epitope tags

Cell type

Cell type Class
Blood
Cell type
Hematopoietic Stem Cells
MeSH Description
Progenitor cells from which all blood cells derived. They are found primarily in the bone marrow and also in small numbers in the peripheral blood.

Attributes by original data submitter

Sample

source_name
differentiating murine hematopoietic cells
strain
129P2/OlaHsd
cell type
hemogenic endothelium
treated with
0.3 µl/ml doxycycline
chip antibody
Anti-HA
chip antibody vendor
Sigma

Sequenced DNA Library

library_name
GSM989014: RUNX induced (iRunxHE+dox)
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
29637698
Reads aligned (%)
74.6
Duplicates removed (%)
14.9
Number of peaks
27746 (qval < 1E-05)

mm9

Number of total reads
29637698
Reads aligned (%)
74.5
Duplicates removed (%)
14.9
Number of peaks
27748 (qval < 1E-05)

Base call quality data from DBCLS SRA