Antigen

Antigen Class

TFs and others

Antigen

STAT1

Cell type

Cell type Class

Breast

Cell type

MCF-7

Primary Tissue

Breast

Site of Extraction

Pleura

Tissue Diagnosis

Adenocarcinoma

Sample

source_name

breast tumor

cell line

MCF-7 from NCI-60

antibody

Stat1a p91 sc-345

antibody vendor

Santa Cruz

Sequenced DNA Library

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

library_construction_protocol

Lysates were clarified from sonicated nuclei and histone-DNA complexes were isolated with anti-STAT1 antibody

Sequencing Platform

instrument_model

Illumina HiScanSQ

hg38

Number of total reads

16843611

Reads aligned (%)

97.4

Duplicates removed (%)

71.6

Number of peaks

230 (qval < 1E-05)

hg19

Number of total reads

16843611

Reads aligned (%)

96.7

Duplicates removed (%)

73.3

Number of peaks

262 (qval < 1E-05)