Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
multipotent progenitor
cell type
Tcf3(E2A) deficient pre-pro-B
chip antibody
None
genetic background
C57bl/6
genotype
Tcf3-/-

Sequenced DNA Library

library_name
GSM987811: pre-pro-B, Input
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
15222385
Reads aligned (%)
79.9
Duplicates removed (%)
11.3
Number of peaks
362 (qval < 1E-05)

mm9

Number of total reads
15222385
Reads aligned (%)
79.7
Duplicates removed (%)
11.4
Number of peaks
416 (qval < 1E-05)

Base call quality data from DBCLS SRA