Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Rad21

Cell type

Cell type Class
Blood
Cell type
Pro-B cells
NA
NA

Attributes by original data submitter

Sample

source_name
multipotent progenitor
cell type
Tcf3(E2A) deficient pre-pro-B
chip antibody
Rad21 (ab992, Abcam), lot# GR12688-4
chip antibody manufacturer
Abcam
genetic background
C57bl/6
genotype
Tcf3-/-

Sequenced DNA Library

library_name
GSM987802: pre-pro-B, Rad21 ChIP seq
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

mm10

Number of total reads
24537007
Reads aligned (%)
77.2
Duplicates removed (%)
18.1
Number of peaks
3340 (qval < 1E-05)

mm9

Number of total reads
24537007
Reads aligned (%)
76.9
Duplicates removed (%)
18.1
Number of peaks
3747 (qval < 1E-05)

Base call quality data from DBCLS SRA