SRX176889
GSM986092: ZR75 input r1; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Breast
Cell type
ZR-75-1
Primary Tissue
Breast
Tissue Diagnosis
Adenocarcinoma Ductal

Attributes by original data submitter

Sample

source_name
ZR751_input
cell line
ZR751
cell type
breast cancer cells
stimulated with
Full Media

Sequenced DNA Library

library_name
GSM986092: ZR75_input_r1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
23384873
Reads aligned (%)
78.3
Duplicates removed (%)
3.3
Number of peaks
722 (qval < 1E-05)

hg19

Number of total reads
23384873
Reads aligned (%)
77.7
Duplicates removed (%)
4.2
Number of peaks
891 (qval < 1E-05)

Base call quality data from DBCLS SRA