Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3

Cell type

Cell type Class
Pluripotent stem cell
Cell type
ES cells
NA
NA

Attributes by original data submitter

Sample

source_name
E14 ES cells
cell line
E14
strain
129/Ola
chip antibody
H3
antibody vendor/catalog/lot
Abcam/No 1791/GR50122-1

Sequenced DNA Library

library_name
GSM985052: E14_H3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

mm10

Number of total reads
47434491
Reads aligned (%)
69.2
Duplicates removed (%)
20.5
Number of peaks
639 (qval < 1E-05)

mm9

Number of total reads
47434491
Reads aligned (%)
69.0
Duplicates removed (%)
20.5
Number of peaks
765 (qval < 1E-05)

Base call quality data from DBCLS SRA