Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
AR

Cell type

Cell type Class
Prostate
Cell type
LNCAP
Primary Tissue
Prostate
Tissue Diagnosis
Carcinoma

Attributes by original data submitter

Sample

source_name
prostate cancer cells
cell line
LNCaP
chip antibody
AR
chip antibody manufacturer
Abcam
treatment
EtOH vehicle treated

Sequenced DNA Library

library_name
GSM984386: LNCAP AR vehicle
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

hg38

Number of total reads
13338805
Reads aligned (%)
92.4
Duplicates removed (%)
3.4
Number of peaks
626 (qval < 1E-05)

hg19

Number of total reads
13338805
Reads aligned (%)
91.3
Duplicates removed (%)
4.9
Number of peaks
776 (qval < 1E-05)

Base call quality data from DBCLS SRA