SRX174818
GSM983103: H3122 input 2; Homo sapiens; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Lung
Cell type
NCI-H3122
Primary Tissue
Lung
Tissue Diagnosis
Adenocarcinoma

Attributes by original data submitter

Sample

source_name
H3122_input_2
cell line
NCI-H3122
antibody
none

Sequenced DNA Library

library_name
GSM983103: H3122_input_2
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

hg38

Number of total reads
25842241
Reads aligned (%)
98.6
Duplicates removed (%)
2.8
Number of peaks
1210 (qval < 1E-05)

hg19

Number of total reads
25842241
Reads aligned (%)
97.7
Duplicates removed (%)
4.7
Number of peaks
1247 (qval < 1E-05)

Base call quality data from DBCLS SRA