Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Input control
Antigen
Input control

Cell type

Cell type Class
Pancreas
Cell type
Pancreatic cancer cells
NA
NA

Attributes by original data submitter

Sample

source_name
Input DNA
cell type
NKC pancreatic cancer cells
chip antibody
None

Sequenced DNA Library

library_name
GSM982511: Input DNA
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer IIx

mm10

Number of total reads
30137250
Reads aligned (%)
96.4
Duplicates removed (%)
40.7
Number of peaks
544 (qval < 1E-05)

mm9

Number of total reads
30137250
Reads aligned (%)
96.2
Duplicates removed (%)
40.8
Number of peaks
636 (qval < 1E-05)

Base call quality data from DBCLS SRA