Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H4K20me1

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
L3 larvae, set-4 mutant, H4K20me1 ChIP
genotype
set-4(n4600)
tissue
whole body
developmental stage
L3 larvae
chip antibody
anti-H4K20me1
chip antibody vendor
Abcam

Sequenced DNA Library

library_name
GSM979033: H4K20me1 ChIP-seq of set-4 mutant, rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

ce11

Number of total reads
32252152
Reads aligned (%)
91.1
Duplicates removed (%)
21.1
Number of peaks
0 (qval < 1E-05)

ce10

Number of total reads
32252152
Reads aligned (%)
91.1
Duplicates removed (%)
21.1
Number of peaks
0 (qval < 1E-05)

Base call quality data from DBCLS SRA