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For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For ce11
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For ce10
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For ce11
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For ce10
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H4K20me1
wikigenes
PDBj
CellType: L3
ATCC
MeSH
RIKEN BRC
SRX172526
GSM979033: H4K20me1 ChIP-seq of set-4 mutant, rep1; Caenorhabditis elegans; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H4K20me1
Cell type
Cell type Class
Larvae
Cell type
L3
NA
NA
Attributes by original data submitter
Sample
source_name
L3 larvae, set-4 mutant, H4K20me1 ChIP
genotype
set-4(n4600)
tissue
whole body
developmental stage
L3 larvae
chip antibody
anti-H4K20me1
chip antibody vendor
Abcam
Sequenced DNA Library
library_name
GSM979033: H4K20me1 ChIP-seq of set-4 mutant, rep1
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
ce11
Number of total reads
32252152
Reads aligned (%)
91.1
Duplicates removed (%)
21.1
Number of peaks
0 (qval < 1E-05)
ce10
Number of total reads
32252152
Reads aligned (%)
91.1
Duplicates removed (%)
21.1
Number of peaks
0 (qval < 1E-05)
Base call quality data from
DBCLS SRA