SRX172525
GSM979032: H4K20me1 ChIP-seq of wild-type; Caenorhabditis elegans; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H4K20me1

Cell type

Cell type Class
Larvae
Cell type
L3
NA
NA

Attributes by original data submitter

Sample

source_name
L3 larvae, wild-type, H4K20me1 ChIP
strain
N2
genotype
wild-type
tissue
whole body
developmental stage
L3 larvae
chip antibody
anti-H4K20me1
chip antibody vendor
Abcam

Sequenced DNA Library

library_name
GSM979032: H4K20me1 ChIP-seq of wild-type
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina HiSeq 2000

Where can I get the processing logs?

Read processing pipeline log

ce11

Number of total reads
15886021
Reads aligned (%)
69.6
Duplicates removed (%)
49.1
Number of peaks
640 (qval < 1E-05)

ce10

Number of total reads
15886021
Reads aligned (%)
69.6
Duplicates removed (%)
49.1
Number of peaks
639 (qval < 1E-05)

Base call quality data from DBCLS SRA