Antigen

Antigen Class

Input control

Antigen

Input control

Cell type

Cell type Class

Blood

Cell type

Th17 Cells

MeSH Description

A subset of helper-effector T-lymphocytes which synthesize and secrete INTERLEUKINS IL-17; IL-17F; and IL-22. These cytokines are involved in host defenses and tissue inflammation in autoimmune diseases.

Sample

source_name

Th17 Cells

strain

C57BL/6

cell type

Th17 Cells

tissue

Spleen

chip antibody

Rabbit IgG (R&D, AB-105-C, ER11)

Sequenced DNA Library

library_name

GSM978766: Th17 IgG

library_strategy

ChIP-Seq

library_source

GENOMIC

library_selection

ChIP

Sequencing Platform

instrument_model

Illumina HiSeq 2000

mm10

Number of total reads

14836356

Reads aligned (%)

93.1

Duplicates removed (%)

63.4

Number of peaks

419 (qval < 1E-05)

mm9

Number of total reads

14836356

Reads aligned (%)

93.0

Duplicates removed (%)

63.5

Number of peaks

388 (qval < 1E-05)