SRX172333
GSM978757: WT CD4 T +IL21 STAT3; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Stat1

Cell type

Cell type Class
Blood
Cell type
CD4+ T cells
NA
NA

Attributes by original data submitter

Sample

source_name
CD4+ T Cells
strain
C57BL/6
cell type
CD4+ T Cells
tissue
Spleen
chip antibody
STAT3 (Invitrogen, 13-7000)

Sequenced DNA Library

library_name
GSM978757: WT CD4 T +IL21 STAT3
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer II

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
26110273
Reads aligned (%)
97.5
Duplicates removed (%)
66.3
Number of peaks
4578 (qval < 1E-05)

mm9

Number of total reads
26110273
Reads aligned (%)
97.3
Duplicates removed (%)
66.5
Number of peaks
4598 (qval < 1E-05)

Base call quality data from DBCLS SRA