SRX172323
GSM978747: WT Bcell -IL21 IRF4; Mus musculus; ChIP-Seq

Sample information curated by ChIP-Atlas

Antigen

Antigen Class
TFs and others
Antigen
Irf4

Cell type

Cell type Class
Blood
Cell type
B cells
NA
NA

Attributes by original data submitter

Sample

source_name
B cells
strain
C57BL/6
cell type
B cells
tissue
Spleen
chip antibody
IRF4 (Santa Cruz, sc-6059)

Sequenced DNA Library

library_name
GSM978747: WT Bcell -IL21 IRF4
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP

Sequencing Platform

instrument_model
Illumina Genome Analyzer

Where can I get the processing logs?

Read processing pipeline log

mm10

Number of total reads
6072465
Reads aligned (%)
59.1
Duplicates removed (%)
8.6
Number of peaks
3449 (qval < 1E-05)

mm9

Number of total reads
6072465
Reads aligned (%)
59.1
Duplicates removed (%)
8.8
Number of peaks
3444 (qval < 1E-05)

Base call quality data from DBCLS SRA