Sample information curated by ChIP-Atlas

Antigen

Antigen Class
Histone
Antigen
H3K4me3

Cell type

Cell type Class
Embryo
Cell type
Neural stem cells
NA
NA

Attributes by original data submitter

Sample

source_name
Neural stem cells
strain
Sca-Gal4/cyo; UAS-3xFLAG-blrp-mCherry-RanGap
tissue
Neural stem cells
Stage
5-7h AEL
chip antibody
H3K4me3
chip antibody vendor
Abcam

Sequenced DNA Library

library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions accompanying the DNA Sample Kit.

Sequencing Platform

instrument_model
Illumina HiSeq 2000

dm6

Number of total reads
55708155
Reads aligned (%)
98.0
Duplicates removed (%)
66.8
Number of peaks
8355 (qval < 1E-05)

dm3

Number of total reads
55708155
Reads aligned (%)
98.3
Duplicates removed (%)
65.4
Number of peaks
8423 (qval < 1E-05)

Base call quality data from DBCLS SRA