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For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
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For dm6
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
For dm3
Colocalization
Target Genes (TSS ± 1kb)
Target Genes (TSS ± 5kb)
Target Genes (TSS ± 10kb)
Download
For dm6
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
For dm3
BigWig
Peak-call (q < 1E-05)
Peak-call (q < 1E-10)
Peak-call (q < 1E-20)
Link Out
Sequence Read Archive
DBCLS SRA
NCBI SRA
ENA
Antigen: H3K4me3
wikigenes
PDBj
CellType: Neural stem cells
ATCC
MeSH
RIKEN BRC
SRX1715673
GSM2127640: NSC H3K4me3; Drosophila melanogaster; ChIP-Seq
Sample information curated by ChIP-Atlas
Antigen
Antigen Class
Histone
Antigen
H3K4me3
Cell type
Cell type Class
Embryo
Cell type
Neural stem cells
NA
NA
Attributes by original data submitter
Sample
source_name
Neural stem cells
strain
Sca-Gal4/cyo; UAS-3xFLAG-blrp-mCherry-RanGap
tissue
Neural stem cells
Stage
5-7h AEL
chip antibody
H3K4me3
chip antibody vendor
Abcam
Sequenced DNA Library
library_strategy
ChIP-Seq
library_source
GENOMIC
library_selection
ChIP
library_construction_protocol
Libraries were prepared according to Illumina's instructions accompanying the DNA Sample Kit.
Sequencing Platform
instrument_model
Illumina HiSeq 2000
Where can I get the processing logs?
Read processing pipeline
log
dm6
Number of total reads
55708155
Reads aligned (%)
98.0
Duplicates removed (%)
66.8
Number of peaks
8355 (qval < 1E-05)
dm3
Number of total reads
55708155
Reads aligned (%)
98.3
Duplicates removed (%)
65.4
Number of peaks
8423 (qval < 1E-05)
Base call quality data from
DBCLS SRA